Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S (2014) MYB118 represses endosperm maturation in seeds of Arabidopsis. Plant Cell 26:3519–3537. https://doi.org/10.1105/tpc.114.130021

Article  CAS  PubMed  PubMed Central  Google Scholar 

Benzing DH, Ott D (1981) Vegetative reduction in epiphytic Bromeliaceae and Orchidaceae: its origin and significance. Biotropica. https://doi.org/10.2307/2387715

Article  Google Scholar 

Boutilier K, Offringa R, Sharma VK, Kieft H, Ouellet T, Zhang L, Hattori J, Liu C-M, van Lammeren AA, Miki BL (2002) Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth. Plant Cell 14:1737–1749. https://doi.org/10.1105/tpc.001941

Article  CAS  PubMed  PubMed Central  Google Scholar 

Burgos-Rivera B, Dawe RK (2012) An Arabidopsis tissue-specific RNAi method for studying genes essential to mitosis. PLoS ONE 7:e51388. https://doi.org/10.1371/journal.pone.0051388

Article  CAS  PubMed  PubMed Central  Google Scholar 

Choi H, Yi T, Ha S-H (2021) Diversity of plastid types and their interconversions. Front Plant Sci 12:692024. https://doi.org/10.3389/fpls.2021.692024

Article  PubMed  PubMed Central  Google Scholar 

Clark SE, Williams RW, Meyerowitz EM (1997) The CLAVATA1gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis. Cell 89:575–585. https://doi.org/10.1016/S0092-8674(00)80239-1

Article  CAS  PubMed  Google Scholar 

Clough SJ, Bent AF (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16:735–743. https://doi.org/10.1046/j.1365-313x.1998.00343.x

Article  CAS  PubMed  Google Scholar 

De Smet I, Vassileva V, De Rybel B, Levesque MP, Grunewald W, Van Damme D, Van Noorden G, Naudts M, Van Isterdael G, De Clercq R (2008) Receptor-like kinase ACR4 restricts formative cell divisions in the Arabidopsis root. Science 322:594–597. https://doi.org/10.1126/science.1160158

Article  CAS  PubMed  Google Scholar 

Di Laurenzio L, Wysocka-Diller J, Malamy JE, Pysh L, Helariutta Y, Freshour G, Hahn MG, Feldmann KA, Benfey PN (1996) The SCARECROW gene regulates an asymmetric cell division that is essential for generating the radial organization of the Arabidopsis root. Cell 86:423–433. https://doi.org/10.1016/S0092-8674(00)80115-4

Article  PubMed  Google Scholar 

Fletcher JC, Brand U, Running MP, Simon Rd, Meyerowitz EM (1999) Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot meristems. Science 283:1911–1914. https://doi.org/10.1126/science.283.5409.1911

Article  CAS  PubMed  Google Scholar 

Flores HE, Hoy MW, Pickard JJ (1987) Secondary metabolites from root cultures. Trends Biotechnol 5:64–69. https://doi.org/10.1016/S0167-7799(87)80013-6

Article  CAS  Google Scholar 

Flores HE, Dai Y, Cuello JL, Maldonado-Mendoza IE, Loyola-Vargas VM (1993) Green roots: photosynthesis and photoautotrophy in an underground plant organ. Plant Physiol 101:363–371. https://doi.org/10.1104/pp.101.2.363

Article  CAS  PubMed  PubMed Central  Google Scholar 

Garcês HM, Champagne CE, Townsley BT, Park S, Malhó R, Pedroso MC, Harada JJ, Sinha NR (2007) Evolution of asexual reproduction in leaves of the genus Kalanchoë. Proc Natl Acad Sci U S A 104:15578–15583. https://doi.org/10.1073/pnas.0704105104

Article  PubMed  PubMed Central  Google Scholar 

Gill AM, Tomlinson PB (1977) Studies on the growth of red mangrove (Rhizophoramangle L.) 4 The adult root system. Biotropica. https://doi.org/10.2307/2387877

Article  Google Scholar 

Groß-Hardt R, Lenhard M, Laux T (2002) WUSCHEL signaling functions in interregional communication during Arabidopsis ovule development. Genes Dev 16:1129–1138. https://doi.org/10.1101/gad.225202

Article  CAS  PubMed  PubMed Central  Google Scholar 

Harding EW, Tang W, Nichols KW, Fernandez DE, Perry SE (2003) Expression and maintenance of embryogenic potential is enhanced through constitutive expression of AGAMOUS-Like 15. Plant Physiol 133:653–663. https://doi.org/10.1104/pp.103.023499

Article  CAS  PubMed  PubMed Central  Google Scholar 

Haseloff J (1998) GFP variants for multispectral imaging of living cells. Methods Cell Sci 58:139–151. https://doi.org/10.1016/S0091-679X(08)61953-6

Article  Google Scholar 

Hill TA, Day CD, Zondlo SC, Thackeray AG, Irish VF (1998) Discrete spatial and temporal cis-acting elements regulate transcription of the Arabidopsis floral homeotic gene APETALA3. Development 125:1711–1721. https://doi.org/10.1242/dev.125.9.1711

Article  CAS  PubMed  Google Scholar 

Hobe M, Müller R, Grünewald M, Brand U, Simon R (2003) Loss of CLE40, a protein functionally equivalent to the stem cell restricting signal CLV3, enhances root waving in Arabidopsis. Dev Genes Evol 213:371–381. https://doi.org/10.1007/s00427-003-0329-5

Article  CAS  PubMed  Google Scholar 

Honma T, Goto K (2000) The Arabidopsis floral homeotic gene PISTILLATA is regulated by discrete cis-elements responsive to induction and maintenance signals. Development 127:2021–2030. https://doi.org/10.1242/dev.127.10.2021

Article  CAS  PubMed  Google Scholar 

Horstman A, Li M, Heidmann I, Weemen M, Chen B, Muino JM, Angenent GC, Boutilier K (2017) The BABY BOOM transcription factor activates the LEC1-ABI3-FUS3-LEC2 network to induce somatic embryogenesis. Plant Physiol 175:848–857. https://doi.org/10.1104/pp.17.00232

Article  CAS  PubMed  PubMed Central  Google Scholar 

Iwase A, Mitsuda N, Koyama T, Hiratsu K, Kojima M, Arai T, Inoue Y, Seki M, Sakakibara H, Sugimoto K (2011) The AP2/ERF transcription factor WIND1 controls cell dedifferentiation in Arabidopsis. Curr Biol 21:508–514. https://doi.org/10.1016/j.cub.2011.02.020

Article  CAS  PubMed  Google Scholar 

Kobayashi K, Baba S, Obayashi T, Sato M, Toyooka K, Keränen M, Aro E-M, Fukaki H, Ohta H, Sugimoto K (2012) Regulation of root greening by light and auxin/cytokinin signaling in Arabidopsis. Plant Cell 24:1081–1095. https://doi.org/10.1105/tpc.111.092254

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kobayashi K, Sasaki D, Noguchi K, Fujinuma D, Komatsu H, Kobayashi M, Sato M, Toyooka K, Sugimoto K, Niyogi KK (2013) Photosynthesis of root chloroplasts developed in Arabidopsis lines overexpressing GOLDEN2-LIKE transcription factors. Plant Cell Physiol 54:1365–1377. https://doi.org/10.1093/pcp/pct086

Article  CAS  PubMed  PubMed Central  Google Scholar 

Kobayashi K, Ohnishi A, Sasaki D, Fujii S, Iwase A, Sugimoto K, Masuda T, Wada H (2017) Shoot removal induces chloroplast development in roots via cytokinin signaling. Plant Physiol 173:2340–2355. https://doi.org/10.1104/pp.16.01368

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lee MM, Schiefelbein J (2002) Cell pattern in the Arabidopsis root epidermis determined by lateral inhibition with feedback. Plant Cell 14:611–618. https://doi.org/10.1105/tpc.010434

Article  CAS  PubMed  PubMed Central  Google Scholar 

Lenhard M, Jürgens G, Laux T (2002) The WUSCHEL and SHOOTMERISTEMLESS genes fulfil complementary roles in Arabidopsis shoot meristem regulation. https://doi.org/10.1242/dev.129.13.3195

Liu YG, Mitsukawa N, Oosumi T, Whittier RF (1995) Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J 8:457–463. https://doi.org/10.1046/j.1365-313X.1995.08030457.x

Article  CAS  PubMed