Adegoke AA, Mvuyo T, Okoh AI (2012) Ubiquitous Acinetobacter species as beneficial commensals but gradually being emboldened with antibiotic resistance genes. J Basic Microbiol 52:620–627. https://doi.org/10.1002/jobm.201100323
Article CAS PubMed Google Scholar
Alam MA, Naik PK (2009) Impact of soil nutrients and environmental factors on podophyllotoxin content among 28 Podophyllum hexandrum populations of northwestern himalayan region using linear and nonlinear approaches. Commun Soil Sci Plant Anal 40:2485–2504. https://doi.org/10.1080/00103620903111368
Anand U, Biswas P, Kumar V et al (2022) Podophyllum hexandrum and its active constitunovel Novel radioprotectants. Biomed Pharmacother 146:112555. https://doi.org/10.1016/j.biopha.2021.112555
Article CAS PubMed Google Scholar
Bailly A, Groenhagen U, Schulz S et al (2014) The inter-kingdom volatile signal indole promotes root development by interfering with auxin signalling. Plant J 80:758–771. https://doi.org/10.1111/tpj.12666
Article CAS PubMed Google Scholar
Bashan Y, De-Bashan LE (2010) How the plant growth-promoting bacterium Azospirillum promotes plant growth—a critical assessment. Adv Agron 108:77–136. https://doi.org/10.1016/S0065-2113(10)08002-8
Bhandare SB, Laddha KS (2016) Simultaneous quantification of kaempferol and quercetin in medicinal plants using HPTLC. Int J Pharm Sci Res 7(6):2379. https://doi.org/10.13040/IJPSR.0975-8232.7
Bhat MA, Kumar V, Bhat MA et al (2020) Mechanistic insights of the interaction of plant growth-promoting rhizobacteria (PGPR) with plant roots toward enhancing plant productivity by alleviating salinity stress. Front Microbiol 11:1952. https://doi.org/10.3389/fmicb.2020.01952
Article PubMed PubMed Central Google Scholar
Biswas D, Biswas P, Nandy S et al (2020) Endophytes producing podophyllotoxin from Podophyllum sp. and other plants: a review on isolation, extraction and bottlenecks. South Afr J Bot 134:303–313. https://doi.org/10.1016/j.sajb.2020.02.038
Bolyen E, Rideout JR, Dillon MR et al (2019) Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2. Nat Biotechnol 37:852–857. https://doi.org/10.1038/s41587-019-0209-9
Article CAS PubMed PubMed Central Google Scholar
Bruto M, Prigent-Combaret C, Muller D, Moënne-Loccoz Y (2014) Analysis of genes contributing to plant-beneficial functions in plant growth-promoting rhizobacteria and related Proteobacteria. Sci Rep 4:6261. https://doi.org/10.1038/srep06261
Article CAS PubMed PubMed Central Google Scholar
Bukhat S, Imran A, Javaid S et al (2020) Communication of plants with microbial world: exploring the regulatory networks for PGPR mediated defense signaling. Microbiol Res 238:126486. https://doi.org/10.1016/j.micres.2020.126486
Article CAS PubMed Google Scholar
Bulgarelli D, Schlaeppi K, Spaepen S et al (2013) Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol 64:807–838. https://doi.org/10.1146/annurev-arplant-050312-120106
Article CAS PubMed Google Scholar
Bünger W, Jiang X, Müller J et al (2020) Novel cultivated endophytic Verrucomicrobia reveal deep-rooting traits of bacteria to associate with plants. Sci Rep 10:8692. https://doi.org/10.1038/s41598-020-65277-6
Article CAS PubMed PubMed Central Google Scholar
Burbano CS, Liu Y, Rösner KL et al (2011) Predominant nifH transcript phylotypes related to Rhizobium rosettiformans in field-grown sugarcane plants and in Norway spruce. Environ Microbiol Rep 3:383–389. https://doi.org/10.1111/j.1758-2229.2010.00238.x
Article CAS PubMed Google Scholar
Callahan BJ, McMurdie PJ, Rosen MJ et al (2016) DADA2: high-resolution sample inference from Illumina amplicon data. Nat Methods 13:581–583. https://doi.org/10.1038/nmeth.3869
Article CAS PubMed PubMed Central Google Scholar
Calle ML (2019) Statistical analysis of metagenomics data. Genomics Inf 17. https://doi.org/10.5808/GI.2019.17.1.e6
Chen R-D, Duan R-G, Zou J-H et al (2016) Flavonoid glycosides from callus cultures of Dysosma Versipellis. Zhongguo Zhong Yao Za Zhi 41:87–91. https://doi.org/10.4268/cjcmm20160117
Chen JZ, Huang XL, Sun QW et al (2023) Bulk soil microbial reservoir or plant recruitment dominates rhizosphere microbial community assembly: evidence from the rare, endangered Lauraceae species Cinmaomum Migao. Ecol Ind 148:110071. https://doi.org/10.1016/j.ecolind.2023.110071
Cheng X, Bi L-W, Li S-N et al (2022) Succession of endophytic bacterial community and its contribution to cinnamon oil production during cinnamon shade-drying process. Food Chemistry: Mol Sci 4:100094. https://doi.org/10.1016/j.fochms.2022.100094
Chong J, Liu P, Zhou G, Xia J (2020) Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data. Nat Protoc 15:799–821. https://doi.org/10.1038/s41596-019-0264-1
Article CAS PubMed Google Scholar
Ciccazzo S, Esposito A, Borruso L, Brusetti L (2016) Microbial communities and primary succession in high altitude mountain environments. Ann Microbiol 66:43–60. https://doi.org/10.1007/s13213-015-1130-1
Compant S, Samad A, Faist H, Sessitsch A (2019) A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application. J Adv Res 19:29–37. https://doi.org/10.1016/j.jare.2019.03.004
Article CAS PubMed PubMed Central Google Scholar
Dalal J, Kulkarni N (2013) Antagonistic and plant growth promoting potentials of indigenous endophytic bacteria of soybean (Glycine max (L) Merril). Curr Res Microbiol Biotechnol 1:62–69. https://doi.org/10.1016/j.bjm.2017.06.007
de Zélicourt A, Synek L, Saad MM et al (2018) Ethylene induced plant stress tolerance by Enterobacter sp. SA187 is mediated by 2-keto‐4‐methylthiobutyric acid production. PLoS Genet 14:e1007273. https://doi.org/10.1371/journal.pgen.1007273
Article CAS PubMed PubMed Central Google Scholar
Devi KA, Pandey G, Rawat AKS et al (2017) The endophytic symbiont—Pseudomonas aeruginosa stimulates the antioxidant activity and growth of Achyranthes aspera L. Front Microbiol 8:1897. https://doi.org/10.3389/fmicb.2017.01897
Article PubMed PubMed Central Google Scholar
Douglas GM, Maffei VJ, Zaneveld JR et al (2020) PICRUSt2 for prediction of metagenome functions. Nat Biotechnol 38:685–688. https://doi.org/10.1038/s41587-020-0548-6
Article CAS PubMed PubMed Central Google Scholar
Duan L, Ding W, Liu X et al (2017) Biosynthesis and engineering of kaempferol in Saccharomyces cerevisiae. Microb Cell Fact 16:1–10. https://doi.org/10.1186/s12934-017-0774-x
Fadiji AE, Babalola OO (2020) Metagenomics methods for the study of plant-associated microbial communities: a review. J Microbiol Methods 170:105860. https://doi.org/10.1016/j.mimet.2020.105860
Article CAS PubMed Google Scholar
Fay DA, Ziegler HW (1985) Botanical source differentiation of podophyllum resin by HPLC. J Liq Chromatogr 8:1501–1505. https://doi.org/10.1080/01483918508067160
Federolf K, Alfermann AW, Fuss E (2007) Aryltetralin-Lignan formation in two different cell suspension cultures of Linum album: Deoxypodophyllotoxin 6-hydroxylase, a key enzyme for the formation of 6-methoxypodophyllotoxin. Phytochemistry 68:1397–1406. https://doi.org/10.1016/j.phytochem.2007.02.031
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